PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008220849.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 456aa    MW: 49675.2 Da    PI: 7.2135
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008220849.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.56.5e-053453831255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  XP_008220849.1 345 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 383
                     7788899*********998.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.547333382IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.58E-9343387IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.44E-5343385No hitNo description
Gene3DG3DSA:4.10.280.101.8E-7347385IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 456 aa     Download sequence    Send to blast
MESANLHHQH HQLQENLVGS SSLAATPSCY AVGTKHAWTP SATLSSSGNS SNSGLDPLNS  60
SMVPDLGFHW LTNITSEHQS PHDLAKIKEE LTSSSSSDHH HHHHNSFPKL TEMLTSAPAS  120
TSIDHDQYYQ FMKNEEKDQL IMNDLSEKLL LKTLSSGCQI NSIINPHHHQ ISSAGEFYSN  180
DHHHHLLHNS NLIGGVPPGM PSRSGGHFSQ IYPSINVSNL NRSLSSSSIS SSSLDMNLQA  240
MDLLGASARF STGTSSSFST QPNSHDTLGL YKETHDSFAT LQQMHQSTDP QRLSCGNNNK  300
ISSFDNEITE VKRPGSSIEP KVNQATAPKK SRLESRTACP PFKVRKEKLG DRIAALQQLV  360
APFGKTDTAS VLMEAIGYIK FLQNQTLSVP YMKSSRNKSC KTMQGGVTEI NGNDETKRDL  420
RSRGLCLVPL SCMSYVTSDI GEGGSIWPAP NFGGGT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008220849.10.0PREDICTED: transcription factor bHLH110 isoform X2
TrEMBLM5XEA10.0M5XEA1_PRUPE; Uncharacterized protein
STRINGVIT_18s0001g12970.t011e-138(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.14e-53bHLH family protein